I found a way to “Disable” some “auto-pair” combos by using Espanso text expander. Below is just an example for the one i fond most annoying:
- trigger: "`"
replace: "`"
label: "Logseq Prevent Doubling the 'BackTick'..."
It also works wit others like “(” or “[”. Hope it helps…
I find that Logseq doesn’t double it anymore as long as Espanso does it’s replacement 
