Error: EPERM: operation not permitted,

I am facing this error everytime I update my content. It shows a comparison between whats on disk and logseq, and asks to commit one or the other.

Can anyone let me know how to fix this issue?

In the left sidebar, go to all graphs and click and there unlink your current graph. You will then have to relink it.

I tried per your suggestion, didnt solve the problem. Still getting the EPREM message.

Could you try clear cache maybe? Do you sync with dropbox?